Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791632.1_cds_XP_016508276.1_2062
CDS Infomation

[gene=LOC107825868] [db_xref=GeneID:107825868] [protein=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like] [protein_id=XP_016508276.1] [location=complement(join(37394..37412,37869..38014,38226..38401,38754..38870,39529..41383))] [gbkey=CDS]
Sequence

ATGCCGTTCACCCTTTTCTCTCTTCCACCTTTCCCTTCACTTCTCCACCATAACCCACCA
CCCCTCCAATTCAAACCCTTCACTTCCCTCCACCATCTCCGCCTCAAGTACCCCACCACC
CTCACCACCGTCTCCGCCATTGGCGCCGACGGAAAATACTACCCCAACCCCTCAGATGAT
GACCCACCTGAAGCACCAGAAGATTCAATGCATGGTGTTAACAAATTCCAGCAAATTCAA
CGCCAAGCAGCTAAAGCAAAAAAGCAACAAGAAGAGCTTTTTAAAAAAGAACAGTCCATT
TTCGTAAATGCATTAGCTGACGTGGAAGATGCACCTGATAATCCTGCTTTAAATGATAAT
GACAATTCTGGGGATGATTTATTTGGTGAAATTGATAAAGCTATTGCCTTGAAAAGAAAA
GAGTTTGTTAAACAAGGCCTTTTAAAGCCTAACCCTCCCAAGAACTCAACTTTAGTTGAA
TCTGAAGTTGAAAATGTTGATGAATTAGAGCCTGAAGAAGTTGTTGATTTAGAGGAGATT
GATGGACTTAGTGGTTTGGCTGAAATTGAAGAAAGTGATGAAGAAAAATCAGATTTTGAG
GTAAGTGATGATATGGGTAAGAGTGAGTTTTCTGATTTATCTTCATTTGATATTGATTTT
GATGAGTTTGGTAAAACTAAGCCAAGAATTGTGGAGCCTAAGTTTAGGATGAGTTTAGCT
GAGCTTTTAGATGAGAGTAGAGTAGTGCCGTTATCAGTATATGGAGATTTAGAGGTTGGG
ATTAGTGGTGTACAACACGATTCGAGGTTGGTTGAGAGTGGTGATTTGTTTGTGTGTTGT
GTTGGGAGGAAAACTGATGGACATTTGTATTTGTCTGAGGCTGATAAGAGAGGGGCTGTT
GCTGTTGTAGCTAGTAAAGAGATTGATATTGAGGAAACTTTGGGGTGTAAAGCATTGGTT
ATTGTGGAGGACACGAATGCAGTGCTTGCAGTGTTAGCTGCTTCGTTTTATAGGCATCCG
TCTAAGAGTATGACGTTGATTGGGATTACGGGAACTAATGGGAAGACTACGACGTCTTAC
TTAATAAAGGCAATGTATGAAGCAATGGGGTTGAGGACGGGCATGTTGAGTACAGTAGGG
TATTATATTTATGGGGATAACAAGTTGGAGTCTCCTCATACGACTCCCGATGCAGTTTTG
GTTCAGAAACTGATGGCGAAGATGGTTCATAACGGGACGGAGGCTTTGGTAATGGAGGCT
TCTTCTCATGGATTGGCATTAGGTCGGTGTGATAAGGTTGATTTCGACATTGCAGTTTTT
ACAAACTTGACGCGGGATCATTTGGATTTTCATGGGACTGAGGAGGAGTATAGGGATGCT
AAGGCTAAGCTGTTTGCGAGGATGGTGGACCCAGCACGACACCGCAAGATTGTAAATATT
GATGATCCTAATGCAGCTTTCTTTTTAGCACAAGGAAACCCAGATGTGCCGATTGTGACT
TTTGCAATGGAGAATAAGAGTGCTGATGTTCATCCCTTGAAGTTTCAATTATCTCTCTTT
GAGACTCAAGTGTTGGTCAACACACCTCAAGGCATATTGGAAATATCTTCTGGCTTGCTT
GGAAGGCATAACATCTATAACATTCTTGCTGCAGTCGCTGTTGGAATTGCGGTTGGAGCA
CCGTTGGAGGACATTGTCAAAGGTATTGAAGAGGTTGATGCAGTCCCTGGTCGGTGTGAA
TTGATAGATGAGGAACAGGCTTTTGGAGTAATTGTTGACTATGCTCATACCCCTGATGCT
TTATCTAGACTACTTGATTATGTGAGAGAGCTTGGCCCTAGGAGGGTTATAACGGTTTTT
GGTTGTGCTGGTGAGAGCGACAGAGGGAAGAGGCCCATAATGGCAAAGATTGCGACAGAT
AAAAGTGATGTGACGATTCTGACATCTGACAATCCAAAGACTGAGGATCCTTTGGACATC
TTGGATGATATGTTGGCTGGTGTGGGATGGTCAATGCAGGACTACTTGAAACACGGAGAG
AATGATTATTACCCCCCTCTCCCCAATGGCCATAGACTCTTCCTACATGATATCAGACGT
GTGGCTGTGCGCTGTGCCGTTGCCATGGGTGAGGAAGGTGATATAGTTGTGGTTGCTGGC
AAAGGCCATGAAACATACCAAATAGAAGGTGACAAAAAGGAATTTTTTGATGATCGAGAG
GAATGTAGAGAAGCTTTGCAGTATGTTGATGAACTTCACCAAGCTGGAATTGACACAAGT
GAATTCCCATGGCGGTTACCGGAGAGTCATTGA

Peptide Sequence

PEP ID

XP_016508276.1
PEP Infomation

PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like [Nicotiana tabacum]
Sequence

MPFTLFSLPPFPSLLHHNPPPLQFKPFTSLHHLRLKYPTTLTTVSAIGADGKYYPNPSDD
DPPEAPEDSMHGVNKFQQIQRQAAKAKKQQEELFKKEQSIFVNALADVEDAPDNPALNDN
DNSGDDLFGEIDKAIALKRKEFVKQGLLKPNPPKNSTLVESEVENVDELEPEEVVDLEEI
DGLSGLAEIEESDEEKSDFEVSDDMGKSEFSDLSSFDIDFDEFGKTKPRIVEPKFRMSLA
ELLDESRVVPLSVYGDLEVGISGVQHDSRLVESGDLFVCCVGRKTDGHLYLSEADKRGAV
AVVASKEIDIEETLGCKALVIVEDTNAVLAVLAASFYRHPSKSMTLIGITGTNGKTTTSY
LIKAMYEAMGLRTGMLSTVGYYIYGDNKLESPHTTPDAVLVQKLMAKMVHNGTEALVMEA
SSHGLALGRCDKVDFDIAVFTNLTRDHLDFHGTEEEYRDAKAKLFARMVDPARHRKIVNI
DDPNAAFFLAQGNPDVPIVTFAMENKSADVHPLKFQLSLFETQVLVNTPQGILEISSGLL
GRHNIYNILAAVAVGIAVGAPLEDIVKGIEEVDAVPGRCELIDEEQAFGVIVDYAHTPDA
LSRLLDYVRELGPRRVITVFGCAGESDRGKRPIMAKIATDKSDVTILTSDNPKTEDPLDI
LDDMLAGVGWSMQDYLKHGENDYYPPLPNGHRLFLHDIRRVAVRCAVAMGEEGDIVVVAG
KGHETYQIEGDKKEFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH

Transcript Sequence

Gene sequence data has not been registered.